Applications

Publications

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2023

Streamlined and sensitive mono- and diribosome profiling in yeast and human cells

Lucas Ferguson, Heather E. Upton, Sydney C. Pimentel, Amanda Mok, Liana F. Lareau, Kathleen Collins, Nicholas T. Ingolia

2022

Ribosome stalling during selenoprotein translation exposes a ferroptosis vulnerability

Zhipeng Li, Lucas Ferguson, Kirandeep K. Deol, Melissa A. Roberts, Leslie Magtanong, Joseph M. Hendricks, Gergey Alzaem Mousa, Seda Kilinc, Kaitlin Schaefer, James A. Wells, Michael C. Bassik, Andrei Goga, Scott J. Dixon, Nicholas T. Ingolia & James A. Olzmann

Separable structural requirements for cDNA synthesis, non-templated extension, and template jumping by a non-LTR retroelement reverse transcriptase

Sydney C. Pimentel, Heather E. Upton, Kathleen Collins

Deep sequencing of yeast and mouse tRNAs and tRNA fragments using OTTR

H. Tobias Gustafsson, Carolina Galan, Tianxiong Yu, Heather E. Upton, Lucas Ferguson, Ebru Kaymak, Zhiping Weng, Kathleen Collins, Oliver J. Rando. Submitted.

2021

Low-bias ncRNA libraries using ordered two-template relay: Serial template jumping by a modified retroelement reverse transcriptase

Heather E. Upton, Lucas Ferguson, Morayma M. Temoche-Diaz, Xiao-Man Liu, Sydney C. Pimentel, Nicholas T. Ingolia, Randy Schekman, and Kathleen Collins